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Table 2 Comparison between immunohistochemistry, CISH and FISH in 33 cell blocks from lung FNAC

From: Chromogenic in situ hybridization to detect EGFR gene copy number in cell blocks from fine-needle aspirates of non small cell lung carcinomas and lung metastases from colo-rectal cancer

IHC score

N° of cases

CISH

FISH

  

D

T

P

A

D

T

P

A

0

9

1

5

3

0

2

2

5

0

1+

3

1

0

2

0

0

0

3

0

2+

5

1

0

4

0

0

0

5

0

3+

16

2

7

6

2

2

5

6

3

Total

33

5

12

14

2

4

7

19

3

  1. IHC: immunohistochemistry; CISH: chromogenic in situ hybridization; FISH: fluorescence in situ hybridization;
  2. D: disomy, 1.6-2.0 balanced gene and chromosome 7; T: trisomy, 2.2-3.0 balanced gene and chromosome 7; P: polysomy, 3.1-4.4 balanced gene and chromosome 7; A: amplified, gene-to-chromosome 7 ratio ≥2
  3. Sensitivity 60%; Specificity 89%; Positive predictive value 50%; Negative predictive value 93%