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Table 1 Primers for amplification and allele frequencies of hypoxia-related polymorphisms

From: The association of 18F-deoxyglucose (FDG) uptake of PET with polymorphisms in the glucose transporter gene (SLC2A1) and hypoxia-related genes (HIF1A, VEGFA, APEX1) in non-small cell lung cancer. SLC2A1 polymorphisms and FDG-PET in NSCLC patients

Gene

SNP name

(rs number)

Primer sequence

Tm

VEGFA

+936C>T

(rs3025039)

Forward

CACTTTGGGTCCGGAGGG

 
  

Reverse

TGATTTAGCAGCAAGAAAAATAAA

55

  

Genotyping

GGCGAATCCAATTCCAAGAGGGACC

 

HIF1A

P582S

(rs11549465)

Forward

TATATCCCAATGGATGATGACTT

 
  

Reverse

TTCTTGTATTTGAGTCTGCTGG

55

  

Genotyping

GTTACGTTCCTTCGATCAGTTGTCA

 

HIF1A

A588T

(rs11549467)

Forward

AGATTTAGACTTGGAGATGTTAGCTC

 
  

Reverse

AATACTGTAACTGTGCTTTGAGGAC

55

  

Genotyping

GTTGTCAYCATTAGAAAGCAGTTCC

 

SLC2A1

-2841A>T

(rs710218)

Forward

CCTTTGCACATGCTCTTC

 
  

Reverse

GCCACCTTGTCCTTCTCT

60

  

Genotyping

CCTGTGGTACAAGTTCTGC

 

APEX1

D148E

(rs1130409)

Forward

CAGTGCCCACTCAAAGTT

 
  

Reverse

CTTGCGAAAGGCTTCAT

60

  

Genotyping

GGCCTTCCTGATCATGCTCCTC

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