Skip to main content

Table 1 Primers and PCR conditions for genotyping the five SNPs

From: Polymorphisms in the SULF1 gene are associated with early age of onset and survival of ovarian cancer

rs number

 

Primers

Annealing Temperature (°C)

PCR products (bp)

Enzyme

Digested PCR products (bp)

rs2623047

FP

5'-TGT GGC AAA CAG TGA AGA GC-3

52

245

BstNI

GG:159/86

G>A

RP

5'-CAG CAA GAC GTT TTC CCT TC-3'

   

GA:245/159/86

      

AA:245

rs13264163

FP

5'-TGG CAA TTT TGC TCT TTT CC-3'

55

181

NspI

AA:100/81

A>G

RP

5'-TGA CAT AGA GTG CCC AGG TG-3

   

GA:181/100/81

      

GG:181 G

rs6990375

FP

5'-CCG CAG AAC ACC GAA GTA AT-3'

55

227

HhaI

GG:128/99

G>A

RP

5'-CCA GGG TAG CTT GGA ATG TT-3

   

GA:227/128/99

      

AA:227

rs3802278

FP

5'-CTG GAA ACC GAT TTC AGT GG-3'

55

227

Cac8I

GG:151/76

G>A

RP

5'-CCC GCT ATG CTG GAA TTA CT-3

   

GA:227/151/76

      

AA:227

rs3087714

FP

5'- TTC CTG AAG CCA GAA TTG TTC-3'

55

150

CviQI

CC:150

C>T

RP

5'- TAT CAT CGG TGG GAT GAC AG-3'

   

CT:150/101/49

      

TT:101/49