Skip to main content

Table 1 PCR reaction conditions and primer sequences

From: HIF-1α effects on angiogenic potential in human small cell lung carcinoma

Gene

Primer

Tm(°C)

Length(bp)

Human

   

VEGF-A

sense 5'-TGGAAGAAGCAGCCCATGAC-3'

59

375

 

antisense 5'-GCACTAGAGACAAAGACGTG-3'

  

IL-6

sense 5'-TCAATGAGGAGACTTGCCTG-3'

55

410

 

antisense 5'-GATGAGTTGTCATGTCCTGC-3'

  

PDGFC

sense 5'-GCCTCTTCGGGCTTCTCC-3'

56

395

 

antisense5'-TTACTACTCAGGTTGGATTCCGC-3'

  

FN1

sense 5'-CGAAATCACAGCCAGTAG-3'

51

278

 

antisense 5'-ATCACATCCACACGGTAG-3'

  

MMP28

sense 5'-CAAGCCAGTGTGGGGTCT-3'

56

252

 

antisense 5'-TAGCGGTCATCTCGGAAG-3'

  

MMP14

sense 5'-ATGTCTCCCGCCCCA-3'

60

678

 

antisense 5'-TCAGACCTTGTCCAGCAGG-3'

  

GLUT1

sense 5'-CGGGCCAAGAGTGTGCTAAA-3'

62

283

 

antisense 5'-TGACGATACCGGAGCCAATG-3'

  

GLUT2

sense 5'-CCTGAATGCCAAGGGAATCCGG-3'

48

368

 

antisense 5'-GCCAGATGAGGTAATCAATCATAG-3'

  

GAPDH

sense 5'-AGAAGGCTGGGGCTCATTTG-3'

57

258

 

antisense 5'-AGGGGCCATCCACAGTCTTC-3'

  

Chicken

   

VEGF-A

sense 5'-GTCTACGAACGCAGCTTCTG-3'

62

265

 

antisense 5'-TCACATGTCCAAGTGCGCAC-3'

  

IL-6

sense 5'- TTGATGGACTCCCTAAGGC-3'

50

395

 

antisense 5'-GATTCGGGACTGGGTTCTC-3'

  

PDGFC

sense 5'-TTCTCAACCTGGATTCTGC-3'

52

355

 

antisense 5'-AATGGTGTCAGTTCGCTTC-3'

  

FN1

sense 5'-ACCAACATTGACCGCCCTAA-3'

56

458

 

antisense 5'-AATCCCGACACGACAGCAGA-3'

  

MMP28

sense 5'-TGACATCCGCCTGACCTT-3'

57

376

 

antisense 5'-GTCCTGGAAGTGAGTGAAGACC-3'

  

MMP14

sense 5'-CGTGTTCAAGGAGCGGTGGC-3'

61

114

 

antisense 5'-TAGGCGGCGTCGATGCTGT-3'

  

GLUT1

sense 5'-CACTGTTGTTTCGCTCTTCG-3'

42

316

 

antisense 5'-AATGTACTGGAAGCCCATGC-3'

  

GLUT2

sense 5'-AGTTTGGCTACACTGGAG-3'

60

436

 

antisense 5'-AGGATGGTGACCTTCTCC-3'

  

GAPDH

sense 5'-CTTTCCGTGTGCCAACCC-3'

65

108

 

antisense 5'-CATCAGCAGCAGCCTTCACTAC-3'

  
  1. Tm - annealing temperature
  2. Length - the number of bp in the PCR products