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Table 2 Cause-specific differences in telomeric gene expression between cirrhotic and non-cirrhotic liver samples

From: Cause-specific telomere factors deregulation in hepatocellular carcinoma

 

Non-cirrhotic

Cirrhotic

p

 

(n = 12)

HBV (n = 8)

HCV (n = 9)

Alcohol (n = 10)

For HBV

For HCV

For alcohol

Shelterin

POT1

0.0021

0.0000

0.0125

0.0090

0.0480

0.0100

0.0050

PTOP

0.0094

0.0000

0.0037

0.0055

0.0200

ns

ns

RAP1

0.1570

0.0016

0.4210

0.4091

0.0070

0.0080

0.0060

TIN2

0.3510

0.0018

0.0510

0.0804

0.0010

ns

<10-4

TRF1

0.5585

0.0117

0.2271

0.2488

<10-4

ns

ns

TRF2

0.0016

0.0000

0.0016

0.0012

0.0050

ns

ns

Non-Shelterin

HMRE11A

0.0187

0.0006

0.0627

0.0764

ns

ns

0.0070

HMRE11B

0.0359

0.0008

0.0492

0.0886

0.0030

ns

0.0020

Ku70

0.0955

0.0045

0.1704

0.1825

<10-4

ns

0.0440

Ku80

0.0408

0.0033

0.1209

0.1316

0.0200

0.0290

0.0120

NBS1

0.0266

0.0002

0.0304

0.0403

0.0030

ns

ns

RAD50

0.0030

0.0002

0.0091

0.0108

ns

0.0180

0.0500

TANK1

0.0468

0.0005

0.0788

0.0945

<10-4

ns

0.0030

TANK2

0.0129

0.0000

0.0188

0.0127

0.0200

ns

ns

Pinx1

0.0131

0.0001

0.0083

0.0219

0.0020

ns

0.0210