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Table 3 Cause-specific differences in telomeric gene expression between cirrhotic/fibrotic and HCC tissue samples

From: Cause-specific telomere factors deregulation in hepatocellular carcinoma

 

HBV

HCV

Alcohol

  
 

Cirrhotic and/or Fibrotic (n = 8)

HCC (n = 10)

p

Cirrhotic and/or Fibrotic (n = 9)

HCC (n = 10)

p

Cirrhotic and/or Fibrotic (n = 10)

HCC (n = 10)

p

Shelterin

POT1

0.0000

0.0000

ns

0.0125

0.0203

ns

0.0090

0.0060

ns

PTOP

0.0000

0.0000

ns

0.0037

0.0064

ns

0.0055

0.0071

ns

RAP1

0.0016

0.0000

ns

0.4210

0.5059

ns

0.4091

0.2538

ns

TIN2

0.0018

0.0033

ns

0.0510

0.0581

ns

0.0804

0.0876

ns

TRF1

0.0117

0.0209

ns

0.2271

0.1626

ns

0.2488

0.2886

ns

TRF2

0.0000

0.0000

ns

0.0061

0.0015

ns

0.0012

0.0012

ns

Non Shelterin

HMRE11A

0.0006

0.0000

ns

0.0627

0.0811

ns

0.0764

0.0536

ns

HMRE11B

0.0008

0.0000

ns

0.0492

0.0508

ns

0.0886

0.0850

ns

Ku70

0.0045

0.0024

ns

0.1704

0.2418

ns

0.1825

0.1645

ns

Ku80

0.0033

0.0015

ns

0.1209

0.1494

ns

0.1316

0.0853

ns

NBS1

0.0002

0.0024

ns

0.0304

0.0317

ns

0.0403

0.0501

ns

RAD50

0.0002

0.0000

ns

0.0091

0.0118

ns

0.0108

0.0101

ns

TANK1

0.0005

0.0000

ns

0.0788

0.0761

ns

0.0945

0.0869

ns

TANK2

0.0000

0.0006

ns

0.0188

0.0255

ns

0.0127

0.0171

ns

Pinx1

0.0001

0.0049

ns (0.054)

0.0083

0.0107

ns

0.0219

0.0165

ns