ID | Method | Disease | Subtype | Cytoband | Nearest gene |
---|
DRVIS03185 | PCR | HNC | HPV16 | 1q25 |
TNFSF4
|
DRVIS03195 | Exome-Seq | CC | HPV56 | 3q28 |
TP63
|
DRVIS03198 | Mapping | CC | HPV16 | 1p36.32 |
TP73
|
DRVIS02845 | RS-PCR | CC | HPV16 | 4q13.3 |
RASSF6
|
DRVIS00089 | DIPS-PCR | CC | HPV16 | 2q21.2 |
ARHGEF4
|
DRVIS00246 | DIPS-PCR | CC | HPV16 | 16q24 |
CDH13
|
- The ID of integration events in Dr.VIS v2.0 database, methods for the detection of viral integration, disease associated with samples, HPV subtype and integration locations were shown in column 1, 2, 3, 4, 5 and 6 respectively. HNC, head and neck cancer; CC, cervical carcinoma; Exome-Seq, Exome sequencing; DIPS-PCR, detection of integrated papillomavirus sequences by ligation-mediated PCR; RS-PCR, RNA Template-Specific PCR; Mapping, mapping analysis. TNFSF4 (tumor necrosis factor superfamily member 4), TP63 (tumor protein p63), TP73 (tumor protein p73), ARHGEF4 (Rho guanine nucleotide exchange factor 4), CDH13 (cadherin 13), RASSF6 (Ras association domain family member 6)