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Table 2 Online circRNA databases

From: Circular RNAs: emerging cancer biomarkers and targets

Name Description Website Reference
circBase A comprehensive database for public circRNA datasets http://www.circbase.org [112]
CircInteractome proteins or miRNAs, as well as primer design and siRNA design http://circinteractome.nia.nih.gov [113]
Circnet A database of circular RNAs derived from transcriptome sequencing data http://circnet.mbc.nctu.edu.tw/ [114]
circ2Traits A knowledgebase of human circRNAs associated with diseases or traits http://gyanxet-beta.com/circdb/ [115]
deepBase v2.0 A database of small RNAs, long non-coding RNAs and circular RNAs from deep sequencing http://rna.sysu.edu.cn/deepBase/ [116]
starBase v2.0 circRNA database for miRNA-circRNA interactions http://starbase.sysu.edu.cn/ [117]
CIRCpedia Annotating alternative back-splicing and alternative splicing in circRNAs http://www.picb.ac.cn/rnomics/circpedia [21]
circRNADb A comprehensive database for human circular RNAs with protein-coding annotations. http://reprod.njmu.edu.cn/circrnadb [118]
TSCD A database of tissue-specific circular RNAs in the human and mouse genomes http://gb.whu.edu.cn/TSCD [31]