Skip to main content

Table 2 Online circRNA databases

From: Circular RNAs: emerging cancer biomarkers and targets

Name Description Website Reference
circBase A comprehensive database for public circRNA datasets [112]
CircInteractome proteins or miRNAs, as well as primer design and siRNA design [113]
Circnet A database of circular RNAs derived from transcriptome sequencing data [114]
circ2Traits A knowledgebase of human circRNAs associated with diseases or traits [115]
deepBase v2.0 A database of small RNAs, long non-coding RNAs and circular RNAs from deep sequencing [116]
starBase v2.0 circRNA database for miRNA-circRNA interactions [117]
CIRCpedia Annotating alternative back-splicing and alternative splicing in circRNAs [21]
circRNADb A comprehensive database for human circular RNAs with protein-coding annotations. [118]
TSCD A database of tissue-specific circular RNAs in the human and mouse genomes [31]