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Table 2 Circulating cfDNA In Hepatocellular Carcinoma

From: Clinical applications of liquid biopsy as prognostic and predictive biomarkers in hepatocellular carcinoma: circulating tumor cells and circulating tumor DNA

Ref.

Patients (HCC)

Ethnicity

Blood sample

Controls

Measure methods

Target site

Positive rate

Ren N et al., 2006 [71]

79

China

Plasma

40 (LC: 20; HV: 20)

Quantitative analysis

Real-Time PCR

Chromosome

8p

NA

Iizuka N et al., 2006 [72]

60

Japan

Serum

CLD: 30

Quantitative analysis

Real-Time PCR

GSTP1

NA

Yang Y et al., 2011 [73]

60

China

Plasma

50 (CLD: 21; HV: 29)

Quantitative analysis

FQ-PCR

hTERT

NA

Huang Z et al., 2012 [74]

72

China

Plasma

78 (LC: 72; HV: 41)

Quantitative analysis

Real-Time PCR

Beta-Actin

NA

Piciocchi M et al., 2013 [75]

66

Italy

Plasma

76 (LC: 35; CLD: 41)

Quantitative analysis

Real-Time PCR

hTERT

NA

Huang A et al., 2016 [76]

53

China

Plasma

16: OLT

Quantitative analysis

Real-Time PCR

ALU

NA

Yan L et al., 2017 [77]

24

China

Plasma

62: CLD

Quantitative analysis

Qubit Assay

NA

NA

Wong, I. H et al., 2000

25

China

Plasma

/Serum

55 (LC: 35; HV: 20)

Methylation

MS-PCR

P15

P16

64%

48%

Wong, I. H et al., 2003

29

China

Plasma

CLD: 50

Methylation

MS-PCR

P16INK4a

80%

Yeo, W et al., 2005 [86]

40

United Kingdom

Plasma

HV: 10

Methylation

MS-PCR

RASSF1A

92%

Zhang YJ et al., 2007 [79]

50

China

Plasma

HV: 50

Methylation

MS-PCR

RASSF1A

P15

P16

70%

22%

44%

Chang Hong et al., 2008 [85]

26

China

Plasma

CLD: 16

Methylation

MS-PCR

P16

GSTP1

RASSF1A

APC

19%

19%

26%

61%

Chan, K. C et al., 2008 [87]

63

China

Serum

HV: 50

Methylation

MS-PCR

RASSF1A

93%

Iyer, P et al., 2009

150

Egypt

Plasma

HV: 150

Methylation

MS-PCR

APC

FHIT

P15

P16

53%

67%

10%

46%

Huang, Z. H et al., 2011 [82]

72

China

Plasma

HD: 37

Methylation

MS-PCR

APC

GSTP1

RASSF1A

SFRP1

68%

55%

72%

55%

Iizuka, N et al., 2011 [81]

108

Japan

Serum

CLD: 56

Methylation

MS-PCR

BASP1

CCND2

APC

SPINT2

SRD5A2

CFTR

RASSF1A

62%

64%

17%

35%

8%

56%

92%

Sun, F. K et al., 2012 [84]

43

China

Serum

50 (CLD: 24; HV: 26)

Methylation

MS-PCR

TFPI2

46%

Zhang, P et al., 2013 [89]

31

China

Serum

HV: 21

Methylation

MS-PCR

DBX2

THY1

88%

85%

Han, LY et al., 2014 [90]

160

China

Serum

133 (CLD: 88; HV: 45)

Methylation

MS-PCR

TGR5

48%

Ji, XF et al., 2014 [91]

121

China

Serum

69 (CLD: 37; HV: 31)

Methylation

MS-PCR

MT1M

MT1G

48%

70%

Huang, G et al., 2014 [92]

66

United

States

Serum

CLD:43

Methylation

MS-PCR

INK4A

65%

Wen Lu et al., 2015

36

China

Serum

55 (LC: 17; HV: 38)

Methylation

MS-PCR

RGS10

ST8SIA6

RUNX2

VIM

94%

Xu RH et al., 2017 [93]

1098

China

Plasma

HV: 835

Methylation

MS-PCR

Diagnostic panel (10)

Prognostic panel (8)

85%

  1. HV Healthy Volunteers, IHC Cholangiocarcinoma, LM Liver Metastases, LC Liver Cirrhosis, NA Not Applicable, OLT Other malignant liver tumors, HD Health disease without evidence of HCC, OCD Other cancerous disease, CLD Chronic Liver Disease, LHD Liver healthy donors, BT Benigh tumor