Table 2 Possible binding sites of E2Fs in PARP1 promoter
Model ID | Model name | Score | Relative score | Start | End | Strand | Predicted site sequence |
|---|---|---|---|---|---|---|---|
MA0024.2 | E2F1 | 3.427 | 0.820 | 35 | 45 | −1 | TGAGCTGCAGC |
MA0024.1 | E2F1 | 8.832 | 0.870 | 86 | 93 | 1 | TTTGGGGC |
MA0024.2 | E2F1 | 5.271 | 0.847 | 102 | 112 | 1 | TGGGTGCCAGG |
MA0471.1 | E2F6 | 8.684 | 0.889 | 375 | 385 | −1 | AAGTGGGAGGA |
MA0024.2 | E2F1 | 4.624 | 0.838 | 376 | 386 | −1 | GAAGTGGGAGG |
MA0470.1 | E2F4 | 4.217 | 0.812 | 388 | 398 | −1 | ACTCGGGAGGC |
MA0471.1 | E2F6 | 4.490 | 0.827 | 388 | 398 | −1 | ACTCGGGAGGC |
MA0024.2 | E2F1 | 5.067 | 0.844 | 389 | 399 | −1 | TACTCGGGAGG |
MA0471.1 | E2F6 | 2.914 | 0.804 | 415 | 425 | −1 | TGGTGGCAGGT |
MA0024.2 | E2F1 | 5.276 | 0.847 | 416 | 426 | −1 | GTGGTGGCAGG |
MA0469.1 | E2F3 | 7.755 | 0.840 | 909 | 923 | −1 | CTCCCACCTCGACTT |
MA0024.2 | E2F1 | 6.718 | 0.869 | 914 | 924 | 1 | GAGGTGGGAGG |
MA0470.1 | E2F4 | 5.788 | 0.836 | 915 | 925 | 1 | AGGTGGGAGGA |
MA0471.1 | E2F6 | 10.763 | 0.920 | 915 | 925 | 1 | AGGTGGGAGGA |
MA0024.2 | E2F1 | 6.352 | 0.864 | 1238 | 1248 | 1 | TGGACGGCAGG |
MA0471.1 | E2F6 | 5.290 | 0.839 | 1269 | 1279 | 1 | AGGAGGGTGGA |
MA0024.2 | E2F1 | 5.156 | 0.846 | 1299 | 1309 | −1 | TTGGCCCGAGG |
MA0469.1 | E2F3 | 5.736 | 0.813 | 1319 | 1333 | − 1 | CCCCCGCCTCGGGAA |
MA0024.2 | E2F1 | 5.886 | 0.857 | 1324 | 1334 | 1 | GAGGCGGGGGC |
MA0470.1 | E2F4 | 7.463 | 0.863 | 1325 | 1335 | 1 | AGGCGGGGGCC |
MA0471.1 | E2F6 | 5.390 | 0.841 | 1325 | 1335 | 1 | AGGCGGGGGCC |
MA0471.1 | E2F6 | 6.073 | 0.851 | 1364 | 1374 | 1 | GGGAGAGAGGA |
PB0112.1 | E2F2_2 | 7.546 | 0.807 | 1384 | 1400 | −1 | ACGCCGGCCCCAAACTC |
MA0024.1 | E2F1 | 8.832 | 0.870 | 1387 | 1394 | 1 | TTTGGGGC |
MA0469.1 | E2F3 | 5.222 | 0.806 | 1434 | 1448 | −1 | TTCACGCCTCAGCCT |
MA0024.2 | E2F1 | 7.150 | 0.876 | 1439 | 1449 | 1 | GAGGCGTGAAG |
MA0470.1 | E2F4 | 6.980 | 0.855 | 1440 | 1450 | 1 | AGGCGTGAAGA |
MA0471.1 | E2F6 | 7.460 | 0.871 | 1440 | 1450 | 1 | AGGCGTGAAGA |
MA0024.2 | E2F1 | 2.878 | 0.811 | 1487 | 1497 | −1 | GTCTCGCCAAG |
MA0024.2 | E2F1 | 5.067 | 0.844 | 1560 | 1570 | 1 | TACTCGGGAGG |
MA0470.1 | E2F4 | 4.217 | 0.812 | 1561 | 1571 | 1 | ACTCGGGAGGC |
MA0471.1 | E2F6 | 4.490 | 0.827 | 1561 | 1571 | 1 | ACTCGGGAGGC |
MA0469.1 | E2F3 | 5.644 | 0.811 | 1568 | 1582 | −1 | CTCCCACCTCAGCCT |
MA0024.2 | E2F1 | 6.718 | 0.869 | 1573 | 1583 | 1 | GAGGTGGGAGG |
MA0470.1 | E2F4 | 5.788 | 0.836 | 1574 | 1584 | 1 | AGGTGGGAGGA |
MA0471.1 | E2F6 | 10.763 | 0.920 | 1574 | 1584 | 1 | AGGTGGGAGGA |
PB0112.1 | E2F2_2 | 8.488 | 0.826 | 1619 | 1635 | −1 | GCAGTGCCGCCATCATG |
PB0112.1 | E2F2_2 | 7.730 | 0.810 | 1620 | 1636 | 1 | ATGATGGCGGCACTGCA |
PB0113.1 | E2F3_2 | 7.920 | 0.808 | 1620 | 1636 | 1 | ATGATGGCGGCACTGCA |
MA0470.1 | E2F4 | 3.684 | 0.803 | 1635 | 1645 | −1 | GCGCTGGAGTG |
MA0471.1 | E2F6 | 3.063 | 0.806 | 1635 | 1645 | −1 | GCGCTGGAGTG |
MA0469.1 | E2F3 | 5.667 | 0.812 | 1637 | 1651 | 1 | CTCCAGCGCGGTGAG |
MA0024.2 | E2F1 | 4.515 | 0.836 | 1669 | 1679 | 1 | AAAGGGGGAGG |
MA0471.1 | E2F6 | 5.461 | 0.842 | 1670 | 1680 | 1 | AAGGGGGAGGG |
PB0112.1 | E2F2_2 | 9.187 | 0.840 | 1738 | 1754 | −1 | GACCCGGCGCCACCCCT |
PB0113.1 | E2F3_2 | 10.273 | 0.856 | 1738 | 1754 | −1 | GACCCGGCGCCACCCCT |
MA0024.2 | E2F1 | 4.195 | 0.831 | 1742 | 1752 | 1 | GTGGCGCCGGG |
MA0024.2 | E2F1 | 4.281 | 0.832 | 1821 | 1831 | 1 | CACCCGGCAGG |
MA0024.2 | E2F1 | 5.062 | 0.844 | 1827 | 1837 | −1 | CGGGCGCCTGC |
MA0024.2 | E2F1 | 4.402 | 0.834 | 1828 | 1838 | 1 | CAGGCGCCCGG |
MA0024.2 | E2F1 | 6.411 | 0.864 | 1832 | 1842 | 1 | CGCCCGGGAAA |
MA0470.1 | E2F4 | 7.805 | 0.868 | 1833 | 1843 | 1 | GCCCGGGAAAC |
MA0471.1 | E2F6 | 5.723 | 0.845 | 1833 | 1843 | 1 | GCCCGGGAAAC |
MA0024.1 | E2F1 | 7.993 | 0.841 | 1835 | 1842 | −1 | TTTCCCGG |
MA0470.1 | E2F4 | 3.661 | 0.803 | 1847 | 1857 | −1 | GGCCGGGGGGC |
MA0024.2 | E2F1 | 6.975 | 0.873 | 1853 | 1863 | 1 | CGGCCGGCAGG |
MA0470.1 | E2F4 | 3.553 | 0.801 | 1854 | 1864 | 1 | GGCCGGCAGGG |
PB0008.1 | E2F2_1 | 8.763 | 0.811 | 1860 | 1874 | 1 | CAGGGGGCGCGCGCG |
PB0009.1 | E2F3_1 | 9.191 | 0.826 | 1860 | 1874 | 1 | CAGGGGGCGCGCGCG |
MA0024.2 | E2F1 | 6.297 | 0.863 | 1863 | 1873 | 1 | GGGGCGCGCGC |
PB0008.1 | E2F2_1 | 8.245 | 0.800 | 1863 | 1877 | −1 | CGGCGCGCGCGCCCC |
MA0470.1 | E2F4 | 3.869 | 0.806 | 1864 | 1874 | 1 | GGGCGCGCGCG |
MA0024.2 | E2F1 | 5.095 | 0.845 | 1865 | 1875 | 1 | GGCGCGCGCGC |
MA0024.2 | E2F1 | 5.095 | 0.845 | 1866 | 1876 | −1 | GGCGCGCGCGC |
MA0470.1 | E2F4 | 3.825 | 0.805 | 1879 | 1889 | −1 | GGGCGGGGCCG |
MA0470.1 | E2F4 | 12.687 | 0.946 | 1911 | 1921 | −1 | CCGCGGGAACG |
MA0471.1 | E2F6 | 8.773 | 0.890 | 1911 | 1921 | −1 | CCGCGGGAACG |
MA0024.2 | E2F1 | 6.807 | 0.870 | 1912 | 1922 | -1 | GCCGCGGGAAC |
MA0469.1 | E2F3 | 13.658 | 0.920 | 1913 | 1927 | 1 | TTCCCGCGGCCAGGC |