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Table 1 NATs in the hallmarks of cancer

From: Natural antisense transcripts in the biological hallmarks of cancer: powerful regulators hidden in the dark

NAT

Preferential localization

Cancer type

Mechanism

Hallmark

Ref.

HOTAIR

Nucleus/cytoplasm

Various types

Epigenetic modifications

miRNA sponge

PTM

Resistance to cell death

Activation of invasion and metastasis

Genome instability and mutation

Tumor-promoting inflammation

[29, 31, 125, 165]

HOXA11-AS

Nucleus/cytoplasm

Various types

Epigenetic modifications

miRNA sponge

Sustaining proliferative signaling

Activation of invasion and metastasis

Tumor-promoting inflammation

[34, 168, 187]

ZEB1-AS1

Nucleus/cytoplasm

Various types

Epigenetic modifications

miRNA sponge

Sustaining proliferative signaling

Resistance to cell death

Activation of invasion and metastasis

[40, 42, 46]

KHPS1

Nucleus

Various types

Epigenetic modification

Resistance to cell death

Tumor-promoting inflammation

Reprogramming energy metabolism

[51, 188, 189]

NAT of PTEN

Nucleus

Various types

Epigenetic modification

Evasion of growth suppressors

[56]

AIRN

Nucleus

Various types

Transcriptional interference

Evasion of growth suppressors

[59, 60, 190]

GNG12-AS

Nucleus

Breast cancer

Transcriptional interference

Resistance to cell death

Activation of invasion and metastasis

[63]

EGOT

Nucleus

Breast cancer

Alternative splicing

Resistance to cell death

[67]

ZEB2-AS1

Nucleus/cytoplasm

Various types

Alternative splicing

promotes mRNA stability and translatability

PTM

Sustaining proliferative signaling

Activation of invasion and metastasis

[68, 69, 191]

PCA3

Nucleus

Prostate cancer

RNA editing

Evasion of growth suppressors

[71]

HIF1A-AS2

Nucleus/cytoplasm

Various types

RNA editing

miRNA sponge

Induction of angiogenesis

Tumor-promoting inflammation

Reprogramming energy metabolism

[74, 136, 137]

GLS-AS

Cytoplasm

Pancreatic cancer

RNAi

Sustaining proliferative signaling

Activation of invasion and metastasis

Reprogramming energy metabolism

[80]

PDCD4-AS1

Nucleus

Breast cancer

promotes mRNA stability

Activation of invasion and metastasis

[82]

KRT7-AS1

Nucleus

Gastric cancer

promotes mRNA stability

Sustaining proliferative signaling

Activation of invasion and metastasis

[83]

DHPS

Nucleus/cytoplasm

Gastric cancer

promotes mRNA stability

Sustaining proliferative signaling

[15]

NAT of BCMA

Cytoplasm

Mlultiple myeloma

Translational interference

Resistance to cell death

Tumor-promoting inflammation

[84, 192]

NAT of PU.1

Cytoplasm

Leukemia

Translational interference

Enabling replicative immortality

[86, 193]

ZFAS1

Nucleus/cytoplasm

Osteosarcoma,colorectal cancer

Epigenetic modification

miRNA sponge

Sustaining proliferative signaling

Activation of invasion and metastasis

Induction of angiogenesis

[89, 139]

SOX9-AS1

Cytoplasm

Hepatocellular carcinoma

miRNA sponge

Sustaining proliferative signaling

Activation of invasion and metastasis

[90]

ASB16-AS1

Cytoplasm

Gastric cancer

PTM

Sustaining proliferative signaling

Resistance to cell death

[95]

RHPN1-AS1

Cytoplasm

Cervical cancer

miRNA sponge

Activation of invasion and metastasis

[104]

MYLK-AS1

Cytoplasm

Hepatocellular carcinoma

PTM

Sustaining proliferative signaling

Activation of invasion and metastasis

[105]

PANDAR

Nucleus

Ovarian cancer

Alternative splicing

PTM

Evasion of growth suppressors

[109]

WRAP53α

Nucleus/cytoplasm

Breast cancer

promotes mRNA stability

Evasion of growth suppressors

Resistance to cell death

[110]

FOXD2-AS1

Cytoplasm

Thyroid cancer

miRNA sponge

Enabling replicative immortality

[113]

TP73-AS1

Nucleus

Clear cell renal cell carcinoma, ovarian cancer

Epigenetic modification

Resistance to cell death

Activation of invasion and metastasis

[120, 129]

HAGLROS

Cytoplasm

Colorectal cancer

miRNA sponge

PTM

Resistance to cell death

[121]

HOXD-AS1

Cytoplasm

Lung cancer

miRNA sponge

Sustaining proliferative signaling

Activation of invasion and metastasis

[128]

RAD51-AS1

Cytoplasm

Hepatocellular carcinoma

Translational interference

Genome instability and mutation

[145]

WRAP53β

Cytoplasm

Various types

PTM

Genome instability and mutation

[167]

SIRT1-AS

Cytoplasm

Hepatocellular carcinoma

miRNA sponge

Activation of invasion and metastasis

Genome instability and mutation

[151]

NKX2-1-AS1

Nucleus

Lung cancer

Binding decoy

Avoidance of immune detection and destruction

[154]

ITIH4-AS1

Cytoplasm

Colorectal cancer

PTM

Tumor-promoting inflammation

[169]

IDH1-AS1

Cytoplasm

Cervical cancer

Physical interference

Reprogramming energy metabolism

[176]