Marker | Gene ID | Gene name | Forward primer | Reverse primer |
---|---|---|---|---|
Inflammation | CCR2 | C-C Motif Chemokine Receptor 2 | ATCCACGGCATACTATCAACATC | CAAGGCTCACCATCATCGTAG |
CCL2 | C-C Motif Chemokine Ligand 2 | TTAAAAACCTGGATCGGAACCAA | GCATTAGCTTCAGATTTACGGGT | |
IL6 | Interleukin 6 | TAGTCCTTCCTACCCCAATTTCC | TTGGTCCTTAGCCACTCCTTC | |
IL1β | Interleukin 1 beta | CAACCAACAAGTGATATATTCTCCATG | GATCCACACTCTCCAGCTGCA | |
TNFα | Tumor Necrosis Factor alpha | CATCTTCTAAAATTCGAGTGACAA | TGGGAGTAGACAAGGTACAACCC | |
Inflammasome | iNOS | Inducible Nitric Oxide Synthase | GGCAGCCTGTGAGACCTTTG | GCATTGGAAGTGAAGCGTTC |
NLRP3 | Nod-, LRR- and Pyrin domain-containing Protein 3 | ATCAACAGGCGAGACCTCTG | GTCCTCCTGGCATACCATAGA | |
Caspase 1 | Caspase 1 | AATACAACCACTCGTACACGTC | AGCTCCAACCCTCGGAGAAA | |
Immune suppression | PDL1 | Programmed death-ligand 1 | GACGCAGGCGTTTACTGCT | GCGGTATGGGGCATTGACTTT |
HCC | AFP | Alphafetoprotein | AGCTTCCACGTTAGATTCCTCC | ACAAACTGGGTAAAGGTGATGG |
GP3 | Glypican 3 | TCGACAGCCTCTTTCCCAGTCA | GGTCACGTCTTGCTCCTCG | |
Stemness | MDR1 | Multidrug Resistance 1 | AGCCGTAAGAGGCTGAGGCCG | TCACGTGCCACCTCCGGGTT |
EPCAM | Epithelial Cell Adhesion Molecule | GCGGCTCAGAGAGACTGTG | CCAAGCATTTAGACGCCAGTTT | |
CD44 | Cluster of Differentiation 44 | TCGATTTGAATGTAACCTGCCG | CAGTCCGGGAGATACTGTAGC | |
CD133 | Cluster of Differentiation 133 | CTCCCATCAGTGGATAGAGAACT | ATACCCCCTTTTGACGAGGCT | |
Angiogenesis | CD31 | Cluster of Differentiation 31 | TGCCTTGTTCATGTTGGGTA | CCTCAGAATATTCCAGGGCA |
END | Endoglin | CCACCGGCCATGAACTTGTCCC | AGTGGGGTGAGGAGATCCCAAGG | |
iCAM | Intercellular Adhesion Molecule 1 | GCCTTGGTAGAGGTGACTGAG | GACCGGAGCTGAAAAGTTGTA | |
vCAM | Vascular Cell Adhesion Protein 1 | TGCCGAGCTAAATTACATATTG | CCTTGTGGAGGGATGTACAGA | |
Fibrosis | αSMA | Alpha-Smooth Muscle Actin | CCAGCACCATGAAGATCAAG | TGGAAGGTAGACAGCGAAGC |
COL1A1 | Collagen type 1 alpha | GCTCCTCTTAGGGGCCACT | CCACGTCTCACCATTGGGG | |
TGFβ | Transforming Growth Factor beta | TGAGCGTCACTGGAGTTGTACGG | GGTTCATGTCATGGATGGTGC |