From: Aggressive variants of prostate cancer: underlying mechanisms of neuroendocrine transdifferentiation
Gene (Protein, if not identical) | Aberration in t-NEPC | Effects | Experimental Setting/ Source | Reference |
---|---|---|---|---|
Genetic aberrations | ||||
 PTEN | Deletion | Survival and cell cycle progression | Patient tissue biopsies | |
 TP53 | Mutation | Lineage plasticity | Patient tissue biopsies | [28] |
 RB1 | Deletion | Patient tissue biopsies | [28] | |
 AURKA | Amplification | N-MYC stabilization, cell cycle progression | Patient tissue biopsies | [29] |
 MYCN | Amplification | Attenuation of AR signaling, NE differentiation, DDR activation | Patient tissue biopsies | |
Transcription factors | ||||
 ASCL1 | Induced expression | NE/pro-neural differentiation | Patient tissue biopsies | [32] |
 FOXA1 | Reduced expression | Loss of Epithelial differentiation | Patient tissue biopsies | [33] |
 FOXA2 | Upregulated expression | Pioneering transcription factor, promotion of NE differentiation | Patient tissue biopsies | [34] |
 FOXB2 | Upregulated expression | Activation of WNT-signaling, NE marker expression | Patient tissue biopsies | [35] |
 NKX2-1 (TTF-1) | Upregulated expression | unknown | Patient tissue biopsies | [36] |
 NKX3-1 | Reduced expression | Loss of Epithelial differentiation | Patient tissue biopsies | [37] |
 REST | Reduced expression, alternative splicing | De-repression of neuronal genes, NE differentiation | Patient tissue biopsies | [32] |
 ONECUT2 | Upregulated expression | Attenuation of AR signaling, survival | Patient tissue biopsies | [38] |
 POU3F2 (BRN2) | Upregulated expression | NE differentiation, lineage plasticity | Patient tissue biopsies | [39] |
 POU3F4 (BRN4) | Upregulated expression | NE differentiation | Patient tissue biopsies, PDX | [40] |
 SOX2 | Upregulated expression | Lineage plasticity | Patient tissue biopsies | [32] |
 ZBTB46 | Upregulated expression | NE differentiation, EMT, inflammatory signaling | Patient tissue biopsies | [41] |
Epigenetic factors | ||||
 EZH2 | Upregulated expression | Angiogenesis, NE differentiation | Patient tissue biopsies | [19] |
 PHF8 | Upregulated expression | NE differentiation | Patient tissue biopsies, PDX | [42] |
 KDM1A (LSD1) | Alternative splicing | Cancer progression, therapy resistance, immune signaling | Patient tissue biopsies, PDX | [43] |
 MEAF6 | Alternative splicing | Proliferation, anchorage-independent cell growth | Patient tissue biopsies, PDX | [44] |
 SMARCA4 | Upregulated expression | Cell cycle progression, aggressiveness | Patient tissue biopsies | [45] |
 CBX5 (HP-1a) | Upregulated expression | Repression of luminal differentiation | Patient tissue biopsies, PDX | [46] |
DNA repair pathways | ||||
 PARP1 | Upregulated expression | DDR | Patient tissue biopsies, PDX | [30] |
 SLFN11 | Reduced expression | Cell cycle progression | Patient tissue biopsies | [47] |
Other nuclear factors | ||||
 CCND1 | Upregulated expression | survival | Cell model | [48] |
Reduced expression | unknown | Patient tissue biopsies | [49] | |
 LIN28B | Upregulated expression | Stemness and pluripotency/lineage plasticity | Patient tissue biopsies | [21] |
 PEG10 | Upregulated expression | Cell cycle progression, EMT | Patient tissue biopsies | [32] |
 SRRM4 | Upregulated expression | NE differentiation | Patient tissue biopsies | [50] |
 GIT1 | Alternative splicing, GIT1-A upregulation | Neural differentiation, cell adhesion | Patient tissue biopsies, PDX | [51] |
 BIF1 | Alternative splicing, BIF1b/c upregulation | Survival | Patient tissue biopsies, PDX | [52] |
 BHC80 | Alternative splicing, BHC80-2 upregulation | Cell growth and invasion | Patient tissue biopsies, PDX | [53] |
Signaling pathways | ||||
 mTOR | Increased activity | NE differentiation, reduced growth, increased one-carbon pathway | NEPC cell model | [54] |
 PRKCI | Reduced expression | Cell proliferation, increased one-carbon pathway | Patient tissue biopsies | [55] |
 STAT3 | Increased activity | NE differentiation, proliferation | Cell model | [23] |
 LIFR | Upregulated expression | NE differentiation, cell proliferation | Patient tissue biopsies | [56] |
 WNT7B | Upregulated expression | Tumor growth, stemness, drug resistance | Patient tissue biopsies | [35] |
 WNT11 | Upregulated expression | Promotion of NE differentiation, survival migration | AR- independent Cell model and xenografts | |
 WLS | Upregulated expression | Promotion of Wnt signaling, proliferation, NE differentiation | Patient tissue biopsies | [59] |
 PCDH-PC | Upregulated expression | Wnt activation, NE differentiation | Patient tissue biopsies | |
 CREB1 | Increased activation | NE differentiation, angiogenesis, epigenetic reprogramming | Cell model | [62] |
 RET | Upregulated expression | Tumor growth | Patient tissue biopsies | [63] |
Tumor microenvironment | ||||
 cAMP | Increased concentration | NE differentiation, angiogenesis, epigenetic reprogramming | Cell model | [64] |
 Glutamine | Increased concentration | ATP production, proliferation, NE differentiation | Cell model | [65] |
 IL-6 | Increased concentration | NE differentiation, angiogenesis | Cell model | [64] |
 IL-8 | Upregulated expression | Survival, proliferation | Cell model | [66] |
 GRPR/bombesin | Upregulated expression | Angiogenesis | Cell model | [67] |
 BIRC5 (Survivin) | Upregulated expression | Survival | Patient tissue biopsies | [68] |
 NTS (Neurotensin) | Upregulated expression | NE differentiation | Cell model and xenograft | [69] |
 PTHrH | Upregulated expression | Cell proliferation, treatment-resistance | Cell model | [70] |
 CALCA (Calcitonin) | Upregulated expression | Invasion | Cell model | [71] |
 QRFP (Neuropeptide 26RFa) | Upregulated expression | NE differentiation, migration | Patient tissue biopsies | [72] |
 ADM (Adrenomedullin) | Upregulated expression | NE differentiation | Cell model | [73] |
 ADCYAP1 (Pituitary adenylate cyclase activating polypeptide) | Upregulated expression | Cell proliferation, NE differentiation | Cell model | [74] |
 GABA | Upregulated expression | GRP release | Cell model | [75] |