Fig. 5

Methylated neoantigen burden is inversely correlated with T cell repertoire metrics. a Total number of predicted neoantigens across tumors. b Comparison of predicted neoantigens between TCGA cohort and tumors in our study. Correlation between ratio of methylated neoantigen coding mutations and T-cell c) density, d) richness, e) clonality and f) relative CD8⁺ T cell fraction