Skip to main content

Table 1 Germline mutations identified by GWAS analysis

From: Integrated multi-dimensional analysis highlights DHCR7 mutations involving in cholesterol biosynthesis and contributing therapy of gastric cancer

Chr.a

Variant

Major/Minor Allele

Associated Gene

Caseb

Controlb

MAFc

P_valued

OR (95% CI)

P_value

Case

Control

1:196989521

rs191281603

C/G

CFHR5

102/83/3

258/29/0

0.237

0.051

2.49E-12

7.501 (4.645 ~ 12.113)

7.47E-19

11:126339488

rs240541

A/G

DCPS

46/94/29

13/117/157

0.450

0.751

3.00E-11

0.546 (0.228 ~ 1.312)

1.74E-01

11:71444111

rs104886038

A/G

DHCR7

169/22/0

185/99/0

0.058

0.174

5.74E-09

0.243 (0.147 ~ 0.404)

1.04E-08

  1. aBased on GRCh38
  2. bMajor homozygote/heterozygote/minor homozygote
  3. cMAF, minor allele frequency
  4. dP_value of GWAS based on the combination of the training set and validation set