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Fig. 5 | Journal of Experimental & Clinical Cancer Research

Fig. 5

From: Integrated proteogenomic characterization reveals an imbalanced hepatocellular carcinoma microenvironment after incomplete radiofrequency ablation

Fig. 5

Integrated transcriptomics and proteomics analyses. A Phylogenic tree showing PPI based on the top 50 up- and downregulated proteins in proteomics. The size of the circle represents the degree value of protein interaction. Blue and cyan represent the up- and downregulated proteins, respectively. B PPI diagram based on the top 100 up- and downregulated proteins in proteomics. C PPI diagram based all DEPs in transcriptomics. D Venn diagrams showing that only PRTN3 was upregulated in both transcriptomics and proteomics. E Integrated transcriptomics and proteomics analyses showing significantly different GO terms only in proteomics. F-I GO and KEGG enrichment analyses of integrated transcriptomics and proteomics analyses showing different GO terms and KEGG pathways, respectively

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