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Table 2 Primers used in MeDIP-qPCR assay

From: Effects of DNMT1 silencing on malignant phenotype and methylated gene expression in cervical cancer cells

gene

Sequences

Tm (°C)

Product Size(bp)

MSP

FHIT

F:5'GAAAGCCATAGTGACAGTAACCC3'

R:5'AAAGCCAAAGATTGTGCGATT3'

59

121

 

CCNA1

F:5'CTCCCGAGCCAGGGTTCT3'

R:5'CGTTCTCCCAACAGCCGC3'

59

76

 

PTEN

F:5'GAGCGAATGCAGTCCACG3'

R:5'AGGCAGGGTAGGCTGTTGT3'

59

232

 

CHFR

F:5'TTGCCTCAGTATCTCACTTCTT3'

R:5'TCGCCGTCTTTACTCCTCT3'

59

118

 

SFRP4

F:5'CCCCATTCTTTCCCACCTC3'

R:5'TCGCCTGAAGCCATCGTC3'

59

164

 

PAX1

F:5'AGGAGACCCTGGCATCTTTG3'

R:5'GACGGCGGCTGCTTACTT3'

59

168

 

TSLC1

F:5'GGGAGAACGGCGAGTTTAG3'

R:5'GGCTGAGGGCATCTGTGAG3'

59

215