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Table 1 FAT1 gene status in various HNSCC cell lines

From: The diverse functions of FAT1 in cancer progression: good, bad, or ugly?

Cell line primary name Variant Classification Variant Type Anato Class Anatomy Node Status Gender HPV
BHY Nonsense_Mutation SNP OC Alveolus Negative M Negative
BICR 18 Silent SNP LX Larynx Positive M N/A
  Frame_Shift_Del DEL - - - - -
  Frame_Shift_Ins INS - - - - -
BICR 31 Nonsense_Mutation SNP OC Tongue Positive M N/A
BICR 56 Nonsense_Mutation SNP OC Tongue Positive F N/A
BICR78 Splice_Site SNP OC Oral alveolus N/A M N/A
CAL-33 Nonsense_Mutation SNP OC Tongue Negative M Negative
FaDu Frame_Shift_Del DEL OC Hypopharynx Positive M Negative
H357 Frame_Shift_Del DEL OC Tongue N/A M N/A
  Nonsense_Mutation SNP - - - - -
H376 Missense_Mutation SNP OC Floor of mouth N/A F N/A
HO1N1 Nonsense_Mutation SNP OC Baccul Muc N/A N/A N/A
HO1U1 Nonsense_Mutation SNP OC Mouth Floor N/A N/A N/A
HSC-2 Missense_Mutation SNP OC Floor of mouth Negative M N/A
HSC-3 Frame_Shift_Del DEL OC Tongue Positive M Negative
JHU022 Missense_Mutation SNP LX Larynx Positive M Negative
MDA686TUa Missense_Mutation SNP OP Base of Tongue Positive M Negative
OSC19 Frame_Shift_Del DEL OC Tongue Positive M N/A
PE/CA-PJ41 Missense_Mutation SNP OC N/A N/A F N/A
PE/CA-PJ49 Nonsense_Mutation SNP OC Tongue   M N/A
  Missense_Mutation SNP - - - - -
SCC-15 Missense_Mutation SNP OC Tongue N/A M Negative
SNU-46 Frame_Shift_Del DEL LX Larynx N/A M Negative
SNU-1041 Missense_Mutation SNP OC Pharynx N/A N/A N/A
  Nonsense_Mutation SNP - - - - -
SqCCY1a Frame-Shift-Ins INS OC N/A N/A M Negative
UMSCC1a Missense_Mutation SNP OC Floor of mouth Negative M Negative
UMSCC9 Missense_Mutation SNP OC Tongue Negative F Negative
UMSCC11A Missense_Mutation SNP OC Epiglottis Positive M Negative
UMSCC25 Frame-Shift-Del DEL LN Lymph Node Positive M Negative
UMSCC28 Nonsense_Mutation SNP - True cord Negative F Negative
UMSCC41 Missense_Mutation SNP - Arytenoid Positive M Negative
UMSCC74A Missense_Mutation SNP OP Base of Tongue Negative M Negative
UMSCC74B Missense_Mutation SNP Recurrence Intraoral Negative M Negative
UMSCC76 Missense_Mutation SNP LN Lymph Node Positive M Negative
UMSCC81B Missense_Mutation SNP - True cord Negative M Negative
UMSCC104 Missense_Mutation SNP OC Floor of mouth Positive M Positive
UPCISCC116 Frame_Shift_Del DEL OC ALV Ridge N/A M Nagative
YD-10B Frame_Shift_Del DEL OC Tongue N/A M N/A
  1. Most of the information can be found in CCLE (https//site.broadinstitute.org/ccle/datasets)
  2. a FAT1 status were determined by our group