Fig. 1

Distinct immune components across HCC tissues. A The schematic diagram of CyTOF experiments in this study. B The tSNE plots of immune cells from all samples, colored by different tissues (left) and immune cell types (right). C The expressions of selected markers on tSNE plots as in (B), the CD19_TCRd marker means sharing detection channels of CD19 and TCRd markers, with mutually independent expressed on B cells and γδ T cells. D Frequency comparisons of major immune cell subsets across tissue sites. E The barplot shows the compositions of the major immune components in different tissue sites. Unpaired student’s t-test was used in (D), with *p < 0.05, **p < 0.01, and ***p < 0.001