Table 1 SE-related databases

Identify SEs

ChIP-Seq, 3C, 4C, 5C, Hi-C

dbSUPER

The first comprehensive, interactive database of SEs involved in cellular identity and disease transcriptional control

http://bioinfo.au.tsinghua.edu.cn/dbsuper/

[202]

SEA

Lncludes SEs from several species and information on how they affect cellular identity

http://sea.edbc.org

[203]

Study the function of SEs

CRISPR/Cas9

Cistrome Cancer

A comprehensive resource for predicted "SE" target genes and enhancer profiles and TF targets

http://cistrome.org/CistromeCancer/

[208]

SEA version 3.0

A comprehensive database covering all available SE information for multiple species and will facilitate the study of SE function

http://sea.edbc.org

[209]

Regulatory mechanisms of SEs

3C, 4C, 5C, Hi-C, ChIP-seq,ATAC-Seq, CUT&Tag, CRISPR/Cas9

SE analysis

A database used to analyze the regulatory mechanisms of SEs

http://licpathway.net/SEanalysis

[67]

SEdb

A database that provides basic information about SEs and can also combine, evaluate, and disclose the regulatory mechanisms of SEs

http://www.licpathway.net/sedb

[210]

SELER

SE-lncRNA transcriptional regulation in human malignancies

http://www.seler.cn

[211]

TRCirc

Mainly includes transcription of circRNAs and partial SE-circRNAs

http://www.licpathway.net/TRCirc

[212]